The Process

 

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PCR Experiment Procedure

The group members first collected samples of their own DNA from their cheek cells. Each cell contains the individual's entire genetic make-up or genome. Specific primers were used for the CCR-5 locus. A small portion of the gene which contains the region known to encode the 32bp deletion was amplified and half of the PCR was used to digest it with ECO-R1, a restriction enzyme. Next, the fragments were viewed on a gel. The gel showed that all of the group members are wild-type for the CCR-5. each lambda.gif (901 bytes) represents a microliter.

PCRs were performed with
50 lambda.gif (901 bytes) DNAlysac 30 cycles
10 lambda.gif (901 bytes) PCR 10x buffer 93 degrees Celsius 1 minute
1 lambda.gif (901 bytes) Taq polymerase 60 degrees Celsius 1 minute
2 lambda.gif (901 bytes) 10mm dNTPs 72 degrees Celsius 1 minute
1.5 lambda.gif (901 bytes) CCR-5 forward primer
1.5 lambda.gif (901 bytes) CCR-5 reverse primer
34 lambda.gif (901 bytes) d H2O

            == 100 lambda.gif (901 bytes) all together

ECO-R1 digestion
50 lambda.gif (901 bytes) per were reduced to 17 lambda.gif (901 bytes)
2 lambda.gif (901 bytes) ECO-R1 10x buffer added along with 1 lambda.gif (901 bytes) ECO-R1 enzyme
Incubated for 1 hour at 37 degrees Celsius

 

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Copyright © 1997 Group 12, Biology 181, Fall 1997
The University of Arizona
Last modified: December 09, 1997